pandoc input.md -t pdf --pdf-engine=xelatex -o output.pdf
Convert Markdown to PDF with XeLaTeX
Converts Markdown to PDF with the XeLaTeX engine, which handles Unicode and system fonts better than the default pdflatex. --pdf-engine=xelatex swaps the engine, and xelatex must be installed. Use -V mainfont='DejaVu Sans' to set fonts.
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